Motif View

Internal ID 17873154
Source Database TransTermHP TERM 667
Feature Type terminator
Name
Rho-independent transcription terminator TERM 667
Sequence GCCCGGCCATCGAGCCGGGC
Look for more occurrences
Start 2744453
End 2744472
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCCGCAGCGAAAGA(5' tail) GCCCGGC(5' stem) CATCGA(loop) GCCGGGC(3' stem) TTTTTCGTGGGGGAC(3' tail). Confidence: 100. opp_overlap 2744451 2744453

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685