Motif View

Internal ID 17871646
Source Database TransTermHP TERM 35
Feature Type terminator
Name
Rho-independent transcription terminator TERM 35
Sequence GAGGCTTCACGGAAACGGAAGCCTC
Look for more occurrences
Start 254778
End 254802
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA003 genomic scaffold adggi-supercont1.4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGGTCTTTCTTTCA(5' tail) GAGGCTTCACG(5' stem) GAAA(loop) CG-GAAGCCTC(3' stem) TTTTTTCTGCCAGGG(3' tail). Confidence: 100. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685