| Internal ID | 17869654 | Source Database | TransTermHP TERM 54 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 54
|
| Sequence |
TGAAAAAGGGCCCGTTCGGGCCCTTTTTCA Look for more occurrences |
| Start | 173416 |
| End | 173445 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BWHPSA006 genomic scaffold adhwj-supercont1.2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACGTCGGCGGAACAA(5' tail) TGAAAAAGGGCCC(5' stem) GAAC(loop) GGGCCCTTTTTCA(3' stem) TTGCCGGACAACAGG(3' tail). Confidence: 100. opp_overlap 173423, overlap 173423 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|