| Internal ID | 17869188 | Source Database | TransTermHP TERM 388 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 388
|
| Sequence |
CGAAGAACCCCGGCTCATGGCCGGGGTTCTTCG Look for more occurrences |
| Start | 1634518 |
| End | 1634550 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BWHPSA006 genomic scaffold adhwj-supercont1.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCGCCTGAGATGGAA(5' tail) CGAAGAACCCCGGCC(5' stem) ATG(loop) AGCCGGGGTTCTTCG(3' stem) TTCCTGATTGCTGAA(3' tail). Confidence: 100. opp_overlap 1634518 1634514 1634522 1634525, overlap 1634522 1634525 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|