Motif View

Internal ID 17866311
Source Database TransTermHP TERM 73
Feature Type terminator
Name
Rho-independent transcription terminator TERM 73
Sequence CCTCGGCCTGGGCGCAGGCCGAGG
Look for more occurrences
Start 391899
End 391922
Strand +
Genomic Context Located within gene [Q022_00365]
Replicon Pseudomonas aeruginosa BWHPSA009 genomic scaffold adggc-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGTAGGCCAGCGGCT(5' tail) CCTCGGCCTG(5' stem) GGCG(loop) CAGGCCGAGG(3' stem) TTTCCAGTTGCAGGG(3' tail). Confidence: 93.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685