Motif View

Internal ID 17865541
Source Database TransTermHP TERM 294
Feature Type terminator
Name
Rho-independent transcription terminator TERM 294
Sequence GGCCGCCGGTGCCTCCCCACGCAGGCGGCC
Look for more occurrences
Start 1211777
End 1211806
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA010 genomic scaffold adgfl-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTGCCGAACCGACT(5' tail) GGCCGCCGGTG(5' stem) CCTCCCCA(loop) CGCAGGCGGCC(3' stem) TTTTTTTACCCGCCT(3' tail). Confidence: 100. opp_overlap 1211775, overlap 1211800

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685