Motif View

Internal ID 17864303
Source Database TransTermHP TERM 699
Feature Type terminator
Name
Rho-independent transcription terminator TERM 699
Sequence CGGCGCGTCTCCATGCGGGAGAGCGCCG
Look for more occurrences
Start 2614807
End 2614834
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA012 genomic scaffold adgfC-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTGAAATGCAAAAA(5' tail) CGGCGC-TCTCC(5' stem) CGCAT(loop) GGAGACGCGCCG(3' stem) TTTCGTAACGACTCG(3' tail). Confidence: 100. gap 1, opp_overlap 2614807

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685