Motif View

Internal ID 17863740
Source Database TransTermHP TERM 322
Feature Type terminator
Name
Rho-independent transcription terminator TERM 322
Sequence GATCCCATGCCCCCGGCGGAACGCCGCCGGGGGCATGGTCTG
Look for more occurrences
Start 1032719
End 1032760
Strand -
Genomic Context Located within gene [Q026_05683]
Replicon Pseudomonas aeruginosa BWHPSA013 genomic scaffold adggn-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAACAGGCAAGAAA(5' tail) CAGACCATGCCCCCGGCGG(5' stem) CGTT(loop) CCGCCGGGGGCATGGGATC(3' stem) AGGACTGGGCGGCGG(3' tail). Confidence: 100. overlap 1032721 1032723

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685