Motif View

Internal ID 17862668
Source Database TransTermHP TERM 210
Feature Type terminator
Name
Rho-independent transcription terminator TERM 210
Sequence CGCCCGGGCCGGCTTCCAGCTGTCCCGGGCG
Look for more occurrences
Start 554509
End 554539
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA014 genomic scaffold adgeT-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAAAAAGCGACAAA(5' tail) CGCCCGGGACAGCT(5' stem) GGA(loop) AGCCGGCCCGGGCG(3' stem) CTGTGGTTACGCACT(3' tail). Confidence: 100. opp_overlap 554508, overlap 554501

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685