Internal ID | 17862504 | Source Database | TransTermHP TERM 1078 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1078
|
Sequence |
GGCGTCGGAAGACGCC Look for more occurrences |
Start | 4779541 |
End | 4779556 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas aeruginosa BWHPSA014 genomic scaffold adgeT-supercont1.1, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CCCGGATATGAAAAA(5' tail) GGCGTC(5' stem) TTCC(loop) GACGCC(3' stem) CTTTCCTCAGTACCA(3' tail). Confidence: 100. opp_overlap 4779541 4779540 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|