Motif View

Internal ID 17859231
Source Database TransTermHP TERM 663
Feature Type terminator
Name
Rho-independent transcription terminator TERM 663
Sequence CGCCCGGGCCGGCTTCCAGCTGTCCCGGGCG
Look for more occurrences
Start 2692917
End 2692947
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA017 genomic scaffold adgeW-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAAAAAGCGACAAA(5' tail) CGCCCGGGACAGCT(5' stem) GGA(loop) AGCCGGCCCGGGCG(3' stem) CTGTGGTTACGCACT(3' tail). Confidence: 100. opp_overlap 2692916, overlap 2692909

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685