Motif View

Internal ID 17853715
Source Database TransTermHP TERM 107
Feature Type terminator
Name
Rho-independent transcription terminator TERM 107
Sequence GGCCCGCGCGTCCGCGCGGGCC
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Start 409086
End 409107
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA023 genomic scaffold adgeL-supercont1.4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCCTCTGAAAGAAA(5' tail) GGCCCGCGC(5' stem) GGAC(loop) GCGCGGGCC(3' stem) TCGGGGGTATCGCTT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685