Internal ID | 17849817 |
Source Database | TransTermHP TERM 313 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 313
|
Sequence |
CCATGCCCCCGGCGGAACGCCGCCGGGGGCATGG Look for more occurrences |
Start | 1103021 |
End | 1103054 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas aeruginosa BWHPSA027 genomic scaffold adgfz-supercont1.2, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CAGGCAAGAAACAGA(5' tail) CCATGCCCCCGGCGG(5' stem) CGTT(loop) CCGCCGGGGGCATGG(3' stem) GATCAGGACTGGGCG(3' tail). Confidence: 100. overlap 1103019 1103017 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
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