| Internal ID | 17846791 | Source Database | TransTermHP TERM 148 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 148
|
| Sequence |
GAAAAGCCGCACAGCCTGTAAGGGCGTGCGGCTTTTC Look for more occurrences |
| Start | 524857 |
| End | 524893 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGATTTTCCGACGTG(5' tail) GAAAAGCCGCACAGCCT(5' stem) GTAA(loop) GGGC-GTGCGGCTTTTC(3' stem) TTTAGCGCCTTACCT(3' tail). Confidence: 100. gap 1, opp_overlap 524862, overlap 524862 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|