Motif View

Internal ID 17846412
Source Database TransTermHP TERM 445
Feature Type terminator
Name
Rho-independent transcription terminator TERM 445
Sequence GCCCCGCTATCGCGGGGC
Look for more occurrences
Start 2061490
End 2061507
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCCGCAAGGAAAAA(5' tail) GCCCCGC(5' stem) TATC(loop) GCGGGGC(3' stem) TTTTTCGTGCAGGCC(3' tail). Confidence: 100. opp_overlap 2061490

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685