Motif View

Internal ID 17846204
Source Database TransTermHP TERM 128
Feature Type terminator
Name
Rho-independent transcription terminator TERM 128
Sequence GACCTCGCCGAGGCATCGGCGGGGTC
Look for more occurrences
Start 663376
End 663401
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTCTTTCGGAGAAA(5' tail) GACCCCGCCGA(5' stem) TGCC(loop) TCGGCGAGGTC(3' stem) TTCGCGTCTCGACTC(3' tail). Confidence: 100. opp_overlap 663378

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685