| Internal ID | 17845972 | Source Database | TransTermHP TERM 187 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 187
|
| Sequence |
GAAAACCCCGCCTTGTGCGGGGTTTTC Look for more occurrences |
| Start | 866812 |
| End | 866838 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BL03 genomic scaffold adgeM-supercont1.3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCAGTGGTAGAAGAT(5' tail) GAAAACCCCGC(5' stem) CTTGT(loop) GCGGGGTTTTC(3' stem) TTTAAGGAAGCACTA(3' tail). Confidence: 91. opp_overlap 866812 866811 866817, overlap 866817 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|