Motif View

Internal ID 17845956
Source Database TransTermHP TERM 156
Feature Type terminator
Name
Rho-independent transcription terminator TERM 156
Sequence CCGAGGCCGCCGCGGGCAATCGCGGCGGCCTCGG
Look for more occurrences
Start 696905
End 696938
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL03 genomic scaffold adgeM-supercont1.3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACGCCGGTTAGAAAA(5' tail) CCGAGGCCGCCGCGA(5' stem) TTGC(loop) CCGCGGCGGCCTCGG(3' stem) CACAGACGTGGCTCA(3' tail). Confidence: 100. opp_overlap 696892

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685