Motif View

Internal ID 17845742
Source Database TransTermHP TERM 307
Feature Type terminator
Name
Rho-independent transcription terminator TERM 307
Sequence TCCGCGTTAAACTGCGCGGG
Look for more occurrences
Start 1066472
End 1066491
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL03 genomic scaffold adgeM-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGAGAGAGGAAAAAA(5' tail) CCCGCGC(5' stem) AGTTTA(loop) ACGCGGA(3' stem) ATTGGCGGTCACGCT(3' tail). Confidence: 93. overlap 1066473

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685