Motif View

Internal ID 17844644
Source Database TransTermHP TERM 110
Feature Type terminator
Name
Rho-independent transcription terminator TERM 110
Sequence CGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCG
Look for more occurrences
Start 433170
End 433204
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGTTGCGGGTAAGA(5' tail) CGACGCGGCCGGTGCA(5' stem) TCGC(loop) TGCACCGGCCGCG-CG(3' stem) GAGACTCAGGCCTTG(3' tail). Confidence: 100. gap 1, overlap 433173

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685