Motif View

Internal ID 17843941
Source Database TransTermHP TERM 4
Feature Type terminator
Name
Rho-independent transcription terminator TERM 4
Sequence GGCGCCTTCGGGCGCC
Look for more occurrences
Start 52191
End 52206
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAGGATGAGAAAA(5' tail) GGCGCC(5' stem) CGAA(loop) GGCGCC(3' stem) TTTTTCCGTTGGGGG(3' tail). Confidence: 95. opp_overlap 52191

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685