| Internal ID | 17841590 | Source Database | TransTermHP TERM 628 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 628
|
| Sequence |
CGAAGAACCCCGGCTCATGGCCGGGGTTCTTCG Look for more occurrences |
| Start | 3029252 |
| End | 3029284 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BL07 genomic scaffold adgfo-supercont1.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTCAGCAATCAGGAA(5' tail) CGAAGAACCCCGGCT(5' stem) CAT(loop) GGCCGGGGTTCTTCG(3' stem) TTCCATCTCAGGCGG(3' tail). Confidence: 100. opp_overlap 3029248 3029252 3029256 3029259, overlap 3029256 3029259 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|