Motif View

Internal ID 17840961
Source Database TransTermHP TERM 25
Feature Type terminator
Name
Rho-independent transcription terminator TERM 25
Sequence TTGGCGTATCGCCAG
Look for more occurrences
Start 144425
End 144439
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BL08 genomic scaffold adgeD-supercont1.3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCAAGTGGTTGCCT(5' tail) TTGGCG(5' stem) TAT(loop) CGCCAG(3' stem) TTTTTTCGCGCGTTG(3' tail). Confidence: 93. overlap 144426

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685