Motif View

Internal ID 17840242
Source Database TransTermHP TERM 57
Feature Type terminator
Name
Rho-independent transcription terminator TERM 57
Sequence GGGTTCCGGCGCCAGCCGGAACCC
Look for more occurrences
Start 326909
End 326932
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BL09 genomic scaffold adgge-supercont1.5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGATCCTGGCCCAG(5' tail) GGGTTCCGGC(5' stem) GCCA(loop) GCCGGAACCC(3' stem) TTTTCCATCCGACAC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685