Motif View

Internal ID 17838164
Source Database TransTermHP TERM 432
Feature Type terminator
Name
Rho-independent transcription terminator TERM 432
Sequence GCGACCGGCGCCCGGGCGGCGCCGGTCGC
Look for more occurrences
Start 1532454
End 1532482
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL11 genomic scaffold adgfL-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGTCGGCGAGAAAC(5' tail) GCGACCGGCGCC(5' stem) GCCCG(loop) GGCGCCGGTCGC(3' stem) CGCCACCTCAGAAGT(3' tail). Confidence: 100. overlap 1532453

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685