Motif View

Internal ID 17834032
Source Database TransTermHP TERM 122
Feature Type terminator
Name
Rho-independent transcription terminator TERM 122
Sequence TCCGCGTTAAACTGCGCGGG
Look for more occurrences
Start 501181
End 501200
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL15 genomic scaffold adgeO-supercont1.3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGAGAGAGGAAAAAA(5' tail) CCCGCGC(5' stem) AGTTTA(loop) ACGCGGA(3' stem) ATTGGCGGTCACGCT(3' tail). Confidence: 91. overlap 501182

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685