Motif View

Internal ID 17833476
Source Database TransTermHP TERM 202
Feature Type terminator
Name
Rho-independent transcription terminator TERM 202
Sequence CGGCCCCCTGGCGGAGCGATCCGCCAGGGGGCTG
Look for more occurrences
Start 855257
End 855290
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL15 genomic scaffold adgeO-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGTCGGAAAAAAA(5' tail) CAGCCCCCTGGCGGA(5' stem) TCGC(loop) TCCGCCAGGGGGCCG(3' stem) GGTCGACGCTTCAGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685