| Internal ID | 17829700 | Source Database | TransTermHP TERM 279 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 279
|
| Sequence |
TGAAAAAGGGCGGCCTAGGCCGCCCTTTTTCG Look for more occurrences |
| Start | 1234338 |
| End | 1234369 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BL19 genomic scaffold adgeJ-supercont1.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTCTCTGATCCATCA(5' tail) TGAAAAAGGGCGGC(5' stem) CTAG(loop) GCCGCCCTTTTTCG(3' stem) TTTTCCCCTTCTTGG(3' tail). Confidence: 100. opp_overlap 1234345, overlap 1234339 1234345 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|