Motif View

Internal ID 17829470
Source Database TransTermHP TERM 306
Feature Type terminator
Name
Rho-independent transcription terminator TERM 306
Sequence CGGGGCGGCTATAATCGCCGCCCCG
Look for more occurrences
Start 1000994
End 1001018
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BL20 genomic scaffold adgeI-supercont1.3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTTTCCGATGCCTG(5' tail) CGGGGCGGCTA(5' stem) TAA(loop) TCGCCGCCCCG(3' stem) TTTTCCCGCTGCCGC(3' tail). Confidence: 100. overlap 1000965

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685