Motif View

Internal ID 17828361
Source Database TransTermHP TERM 170
Feature Type terminator
Name
Rho-independent transcription terminator TERM 170
Sequence CGCGGCCGGTGCAGCGATGCACCGGCCGCG
Look for more occurrences
Start 617710
End 617739
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BL21 genomic scaffold adgep-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTGCGGGTAAGACGA(5' tail) CGCGGCCGGTGCA(5' stem) TCGC(loop) TGCACCGGCCGCG(3' stem) CGGAGACTCAGGCCT(3' tail). Confidence: 100. overlap 617707

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685