Motif View

Internal ID 17821422
Source Database TransTermHP TERM 695
Feature Type terminator
Name
Rho-independent transcription terminator TERM 695
Sequence TCCCATGCCCCCGGCGGAACGCCGCCGGGGGCATGGTC
Look for more occurrences
Start 2916034
End 2916071
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa M8A.3 genomic scaffold adger-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACAGGCAAGAAACA(5' tail) GACCATGCCCCCGGCGG(5' stem) CGTT(loop) CCGCCGGGGGCATGGGA(3' stem) TCAGGACTGGGCGGC(3' tail). Confidence: 100. overlap 2916032 2916036

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685