Motif View

Internal ID 17819844
Source Database TransTermHP TERM 9
Feature Type terminator
Name
Rho-independent transcription terminator TERM 9
Sequence GGCGTCGGAAGACGCC
Look for more occurrences
Start 15117
End 15132
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa M9A.1 genomic scaffold adget-supercont1.4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGGTACTGAGGAAAG(5' tail) GGCGTC(5' stem) GGAA(loop) GACGCC(3' stem) TTTTTCATATCCGGG(3' tail). Confidence: 100. opp_overlap 15117 15116

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685