Motif View

Internal ID 17819041
Source Database TransTermHP TERM 77
Feature Type terminator
Name
Rho-independent transcription terminator TERM 77
Sequence GGCGCCTTCGGGCGCC
Look for more occurrences
Start 577640
End 577655
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa M9A.1 genomic scaffold adget-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAGGATGAAAAAA(5' tail) GGCGCC(5' stem) CGAA(loop) GGCGCC(3' stem) TTTTCCCGTTGGGGG(3' tail). Confidence: 100. opp_overlap 577640

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685