Motif View

Internal ID 17818675
Source Database TransTermHP TERM 910
Feature Type terminator
Name
Rho-independent transcription terminator TERM 910
Sequence GACCTCGCCGAGGCATCGGCGGGGTC
Look for more occurrences
Start 4035353
End 4035378
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa C20 genomic scaffold adgfy-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTCTTTCGGAGAAA(5' tail) GACCCCGCCGA(5' stem) TGCC(loop) TCGGCGAGGTC(3' stem) TTCGCGTCTCGACTC(3' tail). Confidence: 93. opp_overlap 4035355

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685