Motif View

Internal ID 17815431
Source Database TransTermHP TERM 464
Feature Type terminator
Name
Rho-independent transcription terminator TERM 464
Sequence GACCTCGCCGAGGCATCGGCGGGGTC
Look for more occurrences
Start 1814296
End 1814321
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa C41 genomic scaffold adgfh-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGTCGAGACGCGAA(5' tail) GACCTCGCCGA(5' stem) GGCA(loop) TCGGCGGGGTC(3' stem) TTTCTCCGAAAGAGG(3' tail). Confidence: 93. opp_overlap 1814298

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685