Motif View

Internal ID 17811220
Source Database TransTermHP TERM 124
Feature Type terminator
Name
Rho-independent transcription terminator TERM 124
Sequence CGGCCCCCTGGCGGAGCGATCCGCCAGGGGGTTG
Look for more occurrences
Start 473250
End 473283
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa CF77 genomic scaffold adgeU-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGTCGGAAAAAAA(5' tail) CAACCCCCTGGCGGA(5' stem) TCGC(loop) TCCGCCAGGGGGCCG(3' stem) GGTCGACGCTTCAGC(3' tail). Confidence: 100. overlap 473253

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685