Motif View

Internal ID 17810565
Source Database TransTermHP TERM 696
Feature Type terminator
Name
Rho-independent transcription terminator TERM 696
Sequence GCCCCTGCTGGACTACGTTAGCAGGGGC
Look for more occurrences
Start 3061224
End 3061251
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa CF614 genomic scaffold adggb-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCAGCTAAGCAAAAA(5' tail) GCCCCTGCT-AAC(5' stem) GTA(loop) GTCCAGCAGGGGC(3' stem) TTTTTCGTAGGTGGT(3' tail). Confidence: 100. gap 1, opp_overlap 3061224

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685