Motif View

Internal ID 17810502
Source Database TransTermHP TERM 602
Feature Type terminator
Name
Rho-independent transcription terminator TERM 602
Sequence CGCCGACCCTAGGGTCGGCG
Look for more occurrences
Start 2563193
End 2563212
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa CF614 genomic scaffold adggb-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGAGGATAAAAAAA(5' tail) CGCCGACC(5' stem) CTAG(loop) GGTCGGCG(3' stem) TTCTTGCATGGCGCG(3' tail). Confidence: 100. opp_overlap 2563193

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685