Motif View

Internal ID 17810260
Source Database TransTermHP TERM 213
Feature Type terminator
Name
Rho-independent transcription terminator TERM 213
Sequence GGCCGCCAGCGGTTGCCCGCCGGCGGCC
Look for more occurrences
Start 911674
End 911701
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa CF614 genomic scaffold adggb-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCAGTACGAAAAAAA(5' tail) GGCCGCCAGCGG(5' stem) TTGC(loop) CCGCCGGCGGCC(3' stem) TTTTGCATGAATGCC(3' tail). Confidence: 100. opp_overlap 911674

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685