| Internal ID | 17809878 | Source Database | TransTermHP TERM 1175 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1175
|
| Sequence |
CGAAAAAGCCCGGCATTCGCCGGGCTTTTTCG Look for more occurrences |
| Start | 5244110 |
| End | 5244141 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa PAK genomic scaffold acUKM-supercont-complete, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTCTGATCAGAACCA(5' tail) CGAAAAAGCCCGGC(5' stem) ATTC(loop) GCCGGGCTTTTTCG(3' stem) TTTTAATCTGCGGTC(3' tail). Confidence: 100. opp_overlap 5244110 5244107 5244117, overlap 5244117 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|