Motif View

Internal ID 17808811
Source Database TransTermHP TERM 123
Feature Type terminator
Name
Rho-independent transcription terminator TERM 123
Sequence CGCCGCATATGATATGCGGCG
Look for more occurrences
Start 522145
End 522165
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa MSH-10 genomic scaffold acUKG-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAAGGCAAAAAAAAA(5' tail) CGCCGCATA(5' stem) TCA(loop) TATGCGGCG(3' stem) CAAGGACAGGGTACC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685