Motif View

Internal ID 17807366
Source Database TransTermHP TERM 12
Feature Type terminator
Name
Rho-independent transcription terminator TERM 12
Sequence GCCCGCCATCTGAGATGGCGGGC
Look for more occurrences
Start 58745
End 58767
Strand -
Genomic Context
Replicon Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_12.13_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAGCAAACAAAAA(5' tail) GCCCGCCATC(5' stem) TCA(loop) GATGGCGGGC(3' stem) TTTTTGTTTGTCTGG(3' tail). Confidence: 100. opp_overlap 58745

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685