Motif View

Internal ID 17804439
Source Database TransTermHP TERM 23
Feature Type terminator
Name
Rho-independent transcription terminator TERM 23
Sequence GCTGGAAGTGAGACCTCGCGCTCGCTTCCAGC
Look for more occurrences
Start 94114
End 94145
Strand +
Genomic Context
Replicon Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_3.4_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCTGGAAGTTGGAA(5' tail) GCTGGAAGTGAG(5' stem) ACCTCGCG(loop) CTCGCTTCCAGC(3' stem) TTTTCGCTTCCAGCT(3' tail). Confidence: 95.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685