Motif View

Internal ID 17803372
Source Database TransTermHP TERM 210
Feature Type terminator
Name
Rho-independent transcription terminator TERM 210
Sequence CGCGGCGCCCTCACAGGCGCCGCG
Look for more occurrences
Start 777491
End 777514
Strand -
Genomic Context
Replicon Pseudomonas sp. URIL14HWK12:I6 H043DRAFT_scaffold00001.1_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCAGCCATAAAAAAA(5' tail) CGCGGCGCC(5' stem) TGTGAG(loop) GGCGCCGCG(3' stem) TTTTTTATGCCAGCA(3' tail). Confidence: 100. opp_overlap 777491

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685