| Internal ID | 17801976 | Source Database | TransTermHP TERM 2 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 2
|
| Sequence |
TGCGAAGCGGCCGGCTCCCTCAAAGGGGCCGGCCGCTTCGCG Look for more occurrences |
| Start | 21315 |
| End | 21356 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. URMO17WK12:I11 H041DRAFT_scaffold00009.9_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAGGCTCATTGGTTT(5' tail) TGCGAAGCGGCCGGCTCCCT(5' stem) CAA(loop) AGGG-GCCGGCCGCTTCGCG(3' stem) TTTTGGGCGACAGAT(3' tail). Confidence: 100. gap 1, overlap 21316 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|