Motif View

Internal ID 17798843
Source Database TransTermHP TERM 70
Feature Type terminator
Name
Rho-independent transcription terminator TERM 70
Sequence GGGCAGCTACGGCTGCCC
Look for more occurrences
Start 308665
End 308682
Strand +
Genomic Context
Replicon Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00005.5_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGGAAAGGGAAAAA(5' tail) GGGCAGC(5' stem) TACG(loop) GCTGCCC(3' stem) TTTTTCATGATTATT(3' tail). Confidence: 100. opp_overlap 308658 308665, overlap 308658

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685