Motif View

Internal ID 17798769
Source Database TransTermHP TERM 91
Feature Type terminator
Name
Rho-independent transcription terminator TERM 91
Sequence CGAGCGCCGCGCCGGCGGCGCTCG
Look for more occurrences
Start 405950
End 405973
Strand -
Genomic Context
Replicon Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00004.4_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGCGCCTGTGAAAC(5' tail) CGAGCGCCGC(5' stem) CGGC(loop) GCGGCGCTCG(3' stem) ATCTCACAGGCGCCA(3' tail). Confidence: 95. overlap 405949

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685