Motif View

Internal ID 17798768
Source Database TransTermHP TERM 90
Feature Type terminator
Name
Rho-independent transcription terminator TERM 90
Sequence TCGAGCGCCGCGCCGGCGGCGCTCGG
Look for more occurrences
Start 405949
End 405974
Strand -
Genomic Context
Replicon Pseudomonas sp. LAIL14HWK12:I9 D903DRAFT_scaffold00004.4_C, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCTGCGCCTGTGAAA(5' tail) CCGAGCGCCGC(5' stem) CGGC(loop) GCGGCGCTCGA(3' stem) TCTCACAGGCGCCAA(3' tail). Confidence: 95. overlap 405950

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685