| Internal ID | 17798275 | Source Database | TransTermHP TERM 116 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 116
|
| Sequence |
CGGCCTGAAACGAAAAAACGCCCCTCGGGGCGTTTTTTTGTGCCTGGGCCG Look for more occurrences |
| Start | 410116 |
| End | 410166 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. LAIL14HWK12:I12 D902DRAFT_scaffold00002.2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CATTACGCTTAATGC(5' tail) CGGCCT-GAAACGAAAAAACGCCC(5' stem) CTCG(loop) GGGCGTTTTTTTGTGCCTGGGCCG(3' stem) TTATCAGCCGCGGGC(3' tail). Confidence: 90. gap 1, opp_overlap 410087 410085 410084 410126 410134, overlap 410134 410157 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|