| Internal ID | 17797870 | Source Database | TransTermHP TERM 56 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 56
|
| Sequence |
GGGTATCGCCGGGGCTGCACGTAGCCCCGGCGTCTTCC Look for more occurrences |
| Start | 318158 |
| End | 318195 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. LAIL14HWK12:I12 D902DRAFT_scaffold00005.5_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCCTAACAGCAAAAA(5' tail) GGAAGACGCCGGGGCTA(5' stem) CGTG(loop) CAGCCCCGGCGATACCC(3' stem) GCTTGTTACGCCGCA(3' tail). Confidence: 100. opp_overlap 318157, overlap 318162 318164 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|